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Phylogenetic footprinting
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#	Item
11	Genome Informatics 15(1): 117–Prediction of Cis-Regulatory Elements of Coregulated Genes Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2004-05-18 00:18:38 Biology Genetics Gene expression DNA Transcription factors RNA TRANSFAC Biological databases Promoter Cis-regulatory element DNA binding site Phylogenetic footprinting
12	Correlation of SNPs with Phylogenetic Footprints Claudia Fried1,2 , Peter Ahnert3 , Peter F. Stadler1,2 1 Bioinformatik, Institut f¨ ur Informatik, Universit¨at Leipzig, Kreuzstraße 7b, D-04103 Add to Reading List Source URL: www.bioinf.uni-leipzig.de Language: English - Date: 2007-07-04 06:23:08 Molecular biology Gene expression Population genetics Single-nucleotide polymorphism Human genome DbSNP Noncoding DNA Coding region Phylogenetic footprinting Biology Genetics DNA
13	Automatic detection of cis-regulatory binding regions Add to Reading List Source URL: icsb-2001.org Language: English - Date: 2001-12-04 14:14:41 Transcription factors DNA Genetics TRANSFAC Phylogenetic footprinting Cis-regulatory element Regulatory sequence Gene Cis-regulatory module Biology Gene expression Molecular biology
14	FamilyRelations: comparative sequence analysis of genomic data C. Titus Brown Tristan De Buysscher Add to Reading List Source URL: icsb-2001.org Language: English - Date: 2001-12-04 14:14:40 Bioinformatics DNA Phylogenetic footprinting Phylogenetics Noncoding DNA Sequence analysis Genomics Regulatory sequence Eric H. Davidson Biology Gene expression Genetics
15	GBVingron_6.qxd Add to Reading List Source URL: www.genomebiology.com Language: English Genetics Molecular biology Bioinformatics Phylogenetic footprinting Cis-regulatory module Sequence motif Conserved non-coding sequence TRANSFAC Regulatory sequence Biology Gene expression DNA
16	BMC Bioinformatics BioMed Central Open Access Add to Reading List Source URL: www.vet.cornell.edu Language: English - Date: 2014-10-03 12:34:40 Bioinformatics Transcription factors Genetics Sequence motif Promoter Phylogenetic footprinting DNA binding site Consensus sequence Microsatellite Biology Gene expression DNA
17	Phylogenetic Footprints and Consitent Sets of Local Alignments Add to Reading List Source URL: www.cs.ucr.edu Language: English - Date: 2011-09-22 14:06:02 Mathematical and theoretical biology Computational phylogenetics Dynamic programming Computational biology Phylogenetic footprinting Smith–Waterman algorithm Phylo STING Science Bioinformatics Applied mathematics
18	Published online May 20, 2004 Nucleic Acids Research, 2004, Vol. 32, No±2900 DOI: nar/gkh614 Identi®cation of sparsely distributed clusters of cis-regulatory elements in sets of co-expressed Add to Reading List Source URL: klab.tch.harvard.edu Language: English - Date: 2011-12-30 11:52:04 Promoter Gene Ridge TRANSFAC Human genome Cis-regulatory element Intron Cis-regulatory module Phylogenetic footprinting Biology Genetics Gene expression
19	774–782 Nucleic Acids Research, 2001, Vol. 29, No. 3 © 2001 Oxford University Press Add to Reading List Source URL: bayesweb.wadsworth.org Language: English - Date: 2002-11-21 11:42:04 DNA binding site Gene Ridge Transcription factor Operon Bioinformatics Promoter Bacterial one-hybrid system TRANSFAC Biology Gene expression Phylogenetic footprinting
20	articles Systematic discovery of regulatory 0 motifs in human promoters and 3 UTRs by comparison of several mammals Add to Reading List Source URL: web.mit.edu Language: English - Date: 2005-02-27 22:16:44 Phylogenetic footprinting Non-coding RNA MiR-122 Sequence motif Promoter Mir-137 Mir-126 Consensus sequence Mir-22 Genetics MicroRNA Biology

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